Serveur d'exploration Stress et Covid

Attention, ce site est en cours de développement !
Attention, site généré par des moyens informatiques à partir de corpus bruts.
Les informations ne sont donc pas validées.

Volatile organic compounds generated by cultures of bacteria and viruses associated with respiratory infections.

Identifieur interne : 000C98 ( Main/Exploration ); précédent : 000C97; suivant : 000C99

Volatile organic compounds generated by cultures of bacteria and viruses associated with respiratory infections.

Auteurs : Amir Abd El Qader [Israël] ; David Lieberman [Israël] ; Yonat Shemer Avni [Israël] ; Natali Svobodin [Israël] ; Tsilia Lazarovitch [Israël] ; Orli Sagi [Israël] ; Yehuda Zeiri [Israël]

Source :

RBID : pubmed:26033043

Descripteurs français

English descriptors

Abstract

Respiratory infections (RI) can be viral or bacterial in origin. In either case, the invasion of the pathogen results in production and release of various volatile organic compounds (VOCs). The present study examines the VOCs released from cultures of five viruses (influenza A, influenza B, adenovirus, respiratory syncitial virus and parainfluenza 1 virus), three bacteria (Moraxella catarrhalis, Haemophilus influenzae and Legionella pneumophila) and Mycoplasma pneumoniae isolated colonies. Our results demonstrate the involvement of inflammation-induced VOCs. Two significant VOCs were identified as associated with infectious bacterial activity, heptane and methylcyclohexane. These two VOCs have been linked in previous studies to oxidative stress effects. In order to distinguish between bacterial and viral positive cultures, we performed principal component analysis including peak identity (retention time) and VOC concentration (i.e. area under the peak) revealing 1-hexanol and 1-heptadecene to be good predictors.

DOI: 10.1002/bmc.3494
PubMed: 26033043


Affiliations:


Links toward previous steps (curation, corpus...)


Le document en format XML

<record>
<TEI>
<teiHeader>
<fileDesc>
<titleStmt>
<title xml:lang="en">Volatile organic compounds generated by cultures of bacteria and viruses associated with respiratory infections.</title>
<author>
<name sortKey="Abd El Qader, Amir" sort="Abd El Qader, Amir" uniqKey="Abd El Qader A" first="Amir" last="Abd El Qader">Amir Abd El Qader</name>
<affiliation wicri:level="1">
<nlm:affiliation>Department of Biomedical Engineering, Ben-Gurion University of the Negev, Beer-Sheva, Israel.</nlm:affiliation>
<country xml:lang="fr">Israël</country>
<wicri:regionArea>Department of Biomedical Engineering, Ben-Gurion University of the Negev, Beer-Sheva</wicri:regionArea>
<wicri:noRegion>Beer-Sheva</wicri:noRegion>
</affiliation>
</author>
<author>
<name sortKey="Lieberman, David" sort="Lieberman, David" uniqKey="Lieberman D" first="David" last="Lieberman">David Lieberman</name>
<affiliation wicri:level="1">
<nlm:affiliation>Pulmonary Unit, Soroka University Medical Center and the Faculty of Health, Sciences, Ben-Gurion University of the Negev, Beer-Sheva, Israel.</nlm:affiliation>
<country xml:lang="fr">Israël</country>
<wicri:regionArea>Pulmonary Unit, Soroka University Medical Center and the Faculty of Health, Sciences, Ben-Gurion University of the Negev, Beer-Sheva</wicri:regionArea>
<wicri:noRegion>Beer-Sheva</wicri:noRegion>
</affiliation>
</author>
<author>
<name sortKey="Shemer Avni, Yonat" sort="Shemer Avni, Yonat" uniqKey="Shemer Avni Y" first="Yonat" last="Shemer Avni">Yonat Shemer Avni</name>
<affiliation wicri:level="1">
<nlm:affiliation>The Laboratory of Viral Diagnostics, Soroka University Medical Center, Faculty of Health Sciences, Ben Gurion University of the Negev, Beer-Sheva, Israel.</nlm:affiliation>
<country xml:lang="fr">Israël</country>
<wicri:regionArea>The Laboratory of Viral Diagnostics, Soroka University Medical Center, Faculty of Health Sciences, Ben Gurion University of the Negev, Beer-Sheva</wicri:regionArea>
<wicri:noRegion>Beer-Sheva</wicri:noRegion>
</affiliation>
</author>
<author>
<name sortKey="Svobodin, Natali" sort="Svobodin, Natali" uniqKey="Svobodin N" first="Natali" last="Svobodin">Natali Svobodin</name>
<affiliation wicri:level="1">
<nlm:affiliation>The Laboratory of Viral Diagnostics, Soroka University Medical Center, Faculty of Health Sciences, Ben Gurion University of the Negev, Beer-Sheva, Israel.</nlm:affiliation>
<country xml:lang="fr">Israël</country>
<wicri:regionArea>The Laboratory of Viral Diagnostics, Soroka University Medical Center, Faculty of Health Sciences, Ben Gurion University of the Negev, Beer-Sheva</wicri:regionArea>
<wicri:noRegion>Beer-Sheva</wicri:noRegion>
</affiliation>
</author>
<author>
<name sortKey="Lazarovitch, Tsilia" sort="Lazarovitch, Tsilia" uniqKey="Lazarovitch T" first="Tsilia" last="Lazarovitch">Tsilia Lazarovitch</name>
<affiliation wicri:level="1">
<nlm:affiliation>Department of Clinical Microbiology, Assaf Harofeh Medical Center, Zerifin, Israel.</nlm:affiliation>
<country xml:lang="fr">Israël</country>
<wicri:regionArea>Department of Clinical Microbiology, Assaf Harofeh Medical Center, Zerifin</wicri:regionArea>
<wicri:noRegion>Zerifin</wicri:noRegion>
</affiliation>
</author>
<author>
<name sortKey="Sagi, Orli" sort="Sagi, Orli" uniqKey="Sagi O" first="Orli" last="Sagi">Orli Sagi</name>
<affiliation wicri:level="1">
<nlm:affiliation>Parasitology Laboratory, Soroka University Medical Center, Faculty of Health Sciences, Ben-Gurion University of the Negev, Beer-Sheva, Israel.</nlm:affiliation>
<country xml:lang="fr">Israël</country>
<wicri:regionArea>Parasitology Laboratory, Soroka University Medical Center, Faculty of Health Sciences, Ben-Gurion University of the Negev, Beer-Sheva</wicri:regionArea>
<wicri:noRegion>Beer-Sheva</wicri:noRegion>
</affiliation>
</author>
<author>
<name sortKey="Zeiri, Yehuda" sort="Zeiri, Yehuda" uniqKey="Zeiri Y" first="Yehuda" last="Zeiri">Yehuda Zeiri</name>
<affiliation wicri:level="1">
<nlm:affiliation>Department of Biomedical Engineering, Ben-Gurion University of the Negev, Beer-Sheva, Israel.</nlm:affiliation>
<country xml:lang="fr">Israël</country>
<wicri:regionArea>Department of Biomedical Engineering, Ben-Gurion University of the Negev, Beer-Sheva</wicri:regionArea>
<wicri:noRegion>Beer-Sheva</wicri:noRegion>
</affiliation>
</author>
</titleStmt>
<publicationStmt>
<idno type="wicri:source">PubMed</idno>
<date when="2015">2015</date>
<idno type="RBID">pubmed:26033043</idno>
<idno type="pmid">26033043</idno>
<idno type="doi">10.1002/bmc.3494</idno>
<idno type="wicri:Area/PubMed/Corpus">000424</idno>
<idno type="wicri:explorRef" wicri:stream="PubMed" wicri:step="Corpus" wicri:corpus="PubMed">000424</idno>
<idno type="wicri:Area/PubMed/Curation">000423</idno>
<idno type="wicri:explorRef" wicri:stream="PubMed" wicri:step="Curation">000423</idno>
<idno type="wicri:Area/PubMed/Checkpoint">000388</idno>
<idno type="wicri:explorRef" wicri:stream="Checkpoint" wicri:step="PubMed">000388</idno>
<idno type="wicri:Area/Ncbi/Merge">000719</idno>
<idno type="wicri:Area/Ncbi/Curation">000719</idno>
<idno type="wicri:Area/Ncbi/Checkpoint">000719</idno>
<idno type="wicri:Area/Main/Merge">000C99</idno>
<idno type="wicri:Area/Main/Curation">000C98</idno>
<idno type="wicri:Area/Main/Exploration">000C98</idno>
</publicationStmt>
<sourceDesc>
<biblStruct>
<analytic>
<title xml:lang="en">Volatile organic compounds generated by cultures of bacteria and viruses associated with respiratory infections.</title>
<author>
<name sortKey="Abd El Qader, Amir" sort="Abd El Qader, Amir" uniqKey="Abd El Qader A" first="Amir" last="Abd El Qader">Amir Abd El Qader</name>
<affiliation wicri:level="1">
<nlm:affiliation>Department of Biomedical Engineering, Ben-Gurion University of the Negev, Beer-Sheva, Israel.</nlm:affiliation>
<country xml:lang="fr">Israël</country>
<wicri:regionArea>Department of Biomedical Engineering, Ben-Gurion University of the Negev, Beer-Sheva</wicri:regionArea>
<wicri:noRegion>Beer-Sheva</wicri:noRegion>
</affiliation>
</author>
<author>
<name sortKey="Lieberman, David" sort="Lieberman, David" uniqKey="Lieberman D" first="David" last="Lieberman">David Lieberman</name>
<affiliation wicri:level="1">
<nlm:affiliation>Pulmonary Unit, Soroka University Medical Center and the Faculty of Health, Sciences, Ben-Gurion University of the Negev, Beer-Sheva, Israel.</nlm:affiliation>
<country xml:lang="fr">Israël</country>
<wicri:regionArea>Pulmonary Unit, Soroka University Medical Center and the Faculty of Health, Sciences, Ben-Gurion University of the Negev, Beer-Sheva</wicri:regionArea>
<wicri:noRegion>Beer-Sheva</wicri:noRegion>
</affiliation>
</author>
<author>
<name sortKey="Shemer Avni, Yonat" sort="Shemer Avni, Yonat" uniqKey="Shemer Avni Y" first="Yonat" last="Shemer Avni">Yonat Shemer Avni</name>
<affiliation wicri:level="1">
<nlm:affiliation>The Laboratory of Viral Diagnostics, Soroka University Medical Center, Faculty of Health Sciences, Ben Gurion University of the Negev, Beer-Sheva, Israel.</nlm:affiliation>
<country xml:lang="fr">Israël</country>
<wicri:regionArea>The Laboratory of Viral Diagnostics, Soroka University Medical Center, Faculty of Health Sciences, Ben Gurion University of the Negev, Beer-Sheva</wicri:regionArea>
<wicri:noRegion>Beer-Sheva</wicri:noRegion>
</affiliation>
</author>
<author>
<name sortKey="Svobodin, Natali" sort="Svobodin, Natali" uniqKey="Svobodin N" first="Natali" last="Svobodin">Natali Svobodin</name>
<affiliation wicri:level="1">
<nlm:affiliation>The Laboratory of Viral Diagnostics, Soroka University Medical Center, Faculty of Health Sciences, Ben Gurion University of the Negev, Beer-Sheva, Israel.</nlm:affiliation>
<country xml:lang="fr">Israël</country>
<wicri:regionArea>The Laboratory of Viral Diagnostics, Soroka University Medical Center, Faculty of Health Sciences, Ben Gurion University of the Negev, Beer-Sheva</wicri:regionArea>
<wicri:noRegion>Beer-Sheva</wicri:noRegion>
</affiliation>
</author>
<author>
<name sortKey="Lazarovitch, Tsilia" sort="Lazarovitch, Tsilia" uniqKey="Lazarovitch T" first="Tsilia" last="Lazarovitch">Tsilia Lazarovitch</name>
<affiliation wicri:level="1">
<nlm:affiliation>Department of Clinical Microbiology, Assaf Harofeh Medical Center, Zerifin, Israel.</nlm:affiliation>
<country xml:lang="fr">Israël</country>
<wicri:regionArea>Department of Clinical Microbiology, Assaf Harofeh Medical Center, Zerifin</wicri:regionArea>
<wicri:noRegion>Zerifin</wicri:noRegion>
</affiliation>
</author>
<author>
<name sortKey="Sagi, Orli" sort="Sagi, Orli" uniqKey="Sagi O" first="Orli" last="Sagi">Orli Sagi</name>
<affiliation wicri:level="1">
<nlm:affiliation>Parasitology Laboratory, Soroka University Medical Center, Faculty of Health Sciences, Ben-Gurion University of the Negev, Beer-Sheva, Israel.</nlm:affiliation>
<country xml:lang="fr">Israël</country>
<wicri:regionArea>Parasitology Laboratory, Soroka University Medical Center, Faculty of Health Sciences, Ben-Gurion University of the Negev, Beer-Sheva</wicri:regionArea>
<wicri:noRegion>Beer-Sheva</wicri:noRegion>
</affiliation>
</author>
<author>
<name sortKey="Zeiri, Yehuda" sort="Zeiri, Yehuda" uniqKey="Zeiri Y" first="Yehuda" last="Zeiri">Yehuda Zeiri</name>
<affiliation wicri:level="1">
<nlm:affiliation>Department of Biomedical Engineering, Ben-Gurion University of the Negev, Beer-Sheva, Israel.</nlm:affiliation>
<country xml:lang="fr">Israël</country>
<wicri:regionArea>Department of Biomedical Engineering, Ben-Gurion University of the Negev, Beer-Sheva</wicri:regionArea>
<wicri:noRegion>Beer-Sheva</wicri:noRegion>
</affiliation>
</author>
</analytic>
<series>
<title level="j">Biomedical chromatography : BMC</title>
<idno type="eISSN">1099-0801</idno>
<imprint>
<date when="2015" type="published">2015</date>
</imprint>
</series>
</biblStruct>
</sourceDesc>
</fileDesc>
<profileDesc>
<textClass>
<keywords scheme="KwdEn" xml:lang="en">
<term>Bacteria (metabolism)</term>
<term>Bacterial Infections (microbiology)</term>
<term>Biomarkers (analysis)</term>
<term>Biomarkers (metabolism)</term>
<term>Cyclohexanes (analysis)</term>
<term>Cyclohexanes (metabolism)</term>
<term>Gas Chromatography-Mass Spectrometry (methods)</term>
<term>Heptanes (analysis)</term>
<term>Heptanes (metabolism)</term>
<term>Humans</term>
<term>Respiratory Tract Infections (microbiology)</term>
<term>Respiratory Tract Infections (virology)</term>
<term>Virus Diseases (virology)</term>
<term>Viruses (metabolism)</term>
<term>Volatile Organic Compounds (analysis)</term>
<term>Volatile Organic Compounds (metabolism)</term>
</keywords>
<keywords scheme="KwdFr" xml:lang="fr">
<term>Bactéries (métabolisme)</term>
<term>Chromatographie gazeuse-spectrométrie de masse ()</term>
<term>Composés organiques volatils (analyse)</term>
<term>Composés organiques volatils (métabolisme)</term>
<term>Cyclohexanes (analyse)</term>
<term>Cyclohexanes (métabolisme)</term>
<term>Heptanes (analyse)</term>
<term>Heptanes (métabolisme)</term>
<term>Humains</term>
<term>Infections bactériennes (microbiologie)</term>
<term>Infections de l'appareil respiratoire (microbiologie)</term>
<term>Infections de l'appareil respiratoire (virologie)</term>
<term>Maladies virales (virologie)</term>
<term>Marqueurs biologiques (analyse)</term>
<term>Marqueurs biologiques (métabolisme)</term>
<term>Virus (métabolisme)</term>
</keywords>
<keywords scheme="MESH" type="chemical" qualifier="analysis" xml:lang="en">
<term>Biomarkers</term>
<term>Cyclohexanes</term>
<term>Heptanes</term>
<term>Volatile Organic Compounds</term>
</keywords>
<keywords scheme="MESH" qualifier="analyse" xml:lang="fr">
<term>Composés organiques volatils</term>
<term>Cyclohexanes</term>
<term>Heptanes</term>
<term>Marqueurs biologiques</term>
</keywords>
<keywords scheme="MESH" qualifier="metabolism" xml:lang="en">
<term>Bacteria</term>
<term>Biomarkers</term>
<term>Cyclohexanes</term>
<term>Heptanes</term>
<term>Viruses</term>
<term>Volatile Organic Compounds</term>
</keywords>
<keywords scheme="MESH" qualifier="methods" xml:lang="en">
<term>Gas Chromatography-Mass Spectrometry</term>
</keywords>
<keywords scheme="MESH" qualifier="microbiologie" xml:lang="fr">
<term>Infections bactériennes</term>
<term>Infections de l'appareil respiratoire</term>
</keywords>
<keywords scheme="MESH" qualifier="microbiology" xml:lang="en">
<term>Bacterial Infections</term>
<term>Respiratory Tract Infections</term>
</keywords>
<keywords scheme="MESH" qualifier="métabolisme" xml:lang="fr">
<term>Bactéries</term>
<term>Composés organiques volatils</term>
<term>Cyclohexanes</term>
<term>Heptanes</term>
<term>Marqueurs biologiques</term>
<term>Virus</term>
</keywords>
<keywords scheme="MESH" qualifier="virologie" xml:lang="fr">
<term>Infections de l'appareil respiratoire</term>
<term>Maladies virales</term>
</keywords>
<keywords scheme="MESH" qualifier="virology" xml:lang="en">
<term>Respiratory Tract Infections</term>
<term>Virus Diseases</term>
</keywords>
<keywords scheme="MESH" xml:lang="en">
<term>Humans</term>
</keywords>
<keywords scheme="MESH" xml:lang="fr">
<term>Chromatographie gazeuse-spectrométrie de masse</term>
<term>Humains</term>
</keywords>
</textClass>
</profileDesc>
</teiHeader>
<front>
<div type="abstract" xml:lang="en">Respiratory infections (RI) can be viral or bacterial in origin. In either case, the invasion of the pathogen results in production and release of various volatile organic compounds (VOCs). The present study examines the VOCs released from cultures of five viruses (influenza A, influenza B, adenovirus, respiratory syncitial virus and parainfluenza 1 virus), three bacteria (Moraxella catarrhalis, Haemophilus influenzae and Legionella pneumophila) and Mycoplasma pneumoniae isolated colonies. Our results demonstrate the involvement of inflammation-induced VOCs. Two significant VOCs were identified as associated with infectious bacterial activity, heptane and methylcyclohexane. These two VOCs have been linked in previous studies to oxidative stress effects. In order to distinguish between bacterial and viral positive cultures, we performed principal component analysis including peak identity (retention time) and VOC concentration (i.e. area under the peak) revealing 1-hexanol and 1-heptadecene to be good predictors.</div>
</front>
</TEI>
<affiliations>
<list>
<country>
<li>Israël</li>
</country>
</list>
<tree>
<country name="Israël">
<noRegion>
<name sortKey="Abd El Qader, Amir" sort="Abd El Qader, Amir" uniqKey="Abd El Qader A" first="Amir" last="Abd El Qader">Amir Abd El Qader</name>
</noRegion>
<name sortKey="Lazarovitch, Tsilia" sort="Lazarovitch, Tsilia" uniqKey="Lazarovitch T" first="Tsilia" last="Lazarovitch">Tsilia Lazarovitch</name>
<name sortKey="Lieberman, David" sort="Lieberman, David" uniqKey="Lieberman D" first="David" last="Lieberman">David Lieberman</name>
<name sortKey="Sagi, Orli" sort="Sagi, Orli" uniqKey="Sagi O" first="Orli" last="Sagi">Orli Sagi</name>
<name sortKey="Shemer Avni, Yonat" sort="Shemer Avni, Yonat" uniqKey="Shemer Avni Y" first="Yonat" last="Shemer Avni">Yonat Shemer Avni</name>
<name sortKey="Svobodin, Natali" sort="Svobodin, Natali" uniqKey="Svobodin N" first="Natali" last="Svobodin">Natali Svobodin</name>
<name sortKey="Zeiri, Yehuda" sort="Zeiri, Yehuda" uniqKey="Zeiri Y" first="Yehuda" last="Zeiri">Yehuda Zeiri</name>
</country>
</tree>
</affiliations>
</record>

Pour manipuler ce document sous Unix (Dilib)

EXPLOR_STEP=$WICRI_ROOT/Sante/explor/StressCovidV1/Data/Main/Exploration
HfdSelect -h $EXPLOR_STEP/biblio.hfd -nk 000C98 | SxmlIndent | more

Ou

HfdSelect -h $EXPLOR_AREA/Data/Main/Exploration/biblio.hfd -nk 000C98 | SxmlIndent | more

Pour mettre un lien sur cette page dans le réseau Wicri

{{Explor lien
   |wiki=    Sante
   |area=    StressCovidV1
   |flux=    Main
   |étape=   Exploration
   |type=    RBID
   |clé=     pubmed:26033043
   |texte=   Volatile organic compounds generated by cultures of bacteria and viruses associated with respiratory infections.
}}

Pour générer des pages wiki

HfdIndexSelect -h $EXPLOR_AREA/Data/Main/Exploration/RBID.i   -Sk "pubmed:26033043" \
       | HfdSelect -Kh $EXPLOR_AREA/Data/Main/Exploration/biblio.hfd   \
       | NlmPubMed2Wicri -a StressCovidV1 

Wicri

This area was generated with Dilib version V0.6.33.
Data generation: Wed May 6 16:44:09 2020. Site generation: Sun Mar 28 08:26:57 2021